Find an existing piece of work and extend it

In the preceeding tutorials, you have learnt how to create a new piece of work from scratch using the Physiome Model Respository and how to reproduce a "published" result. In this tutorial, we will demonstrate how to take an exisiting piece of work, stored in a public workspace, and develop it further to address a new goal.

• Extending an existing CellML model
  • Forking an existing workspace
  • Cloning your forked workspace
  • Quietening the self excitation
  • Adding an electrical stimulation protocol
• Fitting an exisiting model to a dataset using MAP
• Best practice tips

Demonstrate reuse and extensibility

• create new workspace, embed/copy/link to existing (previous) data
• make changes
• expose

The tasks we actually do will depend on MAP Client and OpenCOR features available. Examples might be:

• fit existing model to new data (set of images?)
• copy CellML model/workspace and use text editor to swap one channel for a more complicated one and compare the simulation results.
• apply a new segmentation algorithm to existing images.
• find some muscle models in repository and use them with some simply python script the user could edit?